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Details for Phage HonestAbe
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Detailed Information for Phage HonestAbe
Discovery Information
Found ByHarima Mian and Darsita Patel
Year Found2014
Location FoundWashington D.C, DC United States of America
Finding InstitutionUniversity of Maryland, Baltimore County
Program Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
GPS Coordinates38.8893 N, 77.0501 W Map
Discovery NotesOutside Abraham Lincoln Memorial
Urban Area
~ 28ᵒC
Top Layer
Dry
Naming NotesThe phage was isolated from soil that was found right outside Abraham Lincoln's memorial, which is why we decided to name it HonestAbe
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 27, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage88
Sanger Finishing Reactions2
Genome length (bp)161129
GC Content38.7%
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length2576 bp
End Determination NotesExamination of Illumina reads
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members
Plaque Notes2 mm
Small
Round with smooth edges
Cloudy
MorphotypeMyoviridae
Final annotation complete?Yes
Number of Genes289
Number of tRNAs3
Has been Phamerated?No
Uploaded to GenBank?Yes: MG763894
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload