Details for Phage phiAGATE
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| Detailed Information for Phage phiAGATE | |
| Discovery Information | |
| Found By | Barylski J, Nowicki G, Goździcka-Józefiak A |
| Year Found | 2010 |
| Location Found | Jezioro Góreckie, Poland |
| Program | Obtained from GenBank & Publication |
| From enriched soil sample? | Unknown |
| GPS Coordinates | 52.262778 N, 16.798056 E Map |
| Discovery Notes | Barylski J, Nowicki G, Goździcka-Józefiak A (2014) The Discovery of phiAGATE, A Novel Phage Infecting Bacillus pumilus, Leads to New Insights into the Phylogeny of the Subfamily Spounavirinae. PLOS ONE 9(1): e86632. https://doi.org/10.1371/journal.pone.0086632 Lake Góreckie (a eutrophic lake in western Poland) |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 11, 2013 |
| Sequencing Facility | Other |
| Shotgun Sequencing Method | 454 |
| Approximate Shotgun Coverage | 51 |
| Genome length (bp) | 149844 |
| GC Content | 41.0% |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 2669 bp |
| End Determination Notes | "We found 2669 bp long segment with mean coverage 1.9× higher than the rest of the sequence." |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | W |
| Subcluster | W6 |
| Other Cluster Members | |
| Plaque Notes | TEM: "The head is roughly icosahedral, with diameter of 91.16 (±3.71) nm. The length of the tail is 165.41 (±8.67) nm" |
| Morphotype | Myoviridae |
| Final annotation complete? | Yes |
| Number of Genes | 204 |
| Number of tRNAs | 3 |
| Has been Phamerated? | No |
| Uploaded to GenBank? | Yes: NC_020081 |
| Available Files | |
| EM Picture | Download |
