Details for Phage Harambe
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Detailed Information for Phage Harambe | |
Discovery Information | |
Found By | William Guzman and Viraj Patel |
Year Found | 2016 |
Location Found | Bowie, MD United States |
Finding Institution | University of Maryland, Baltimore County |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
GPS Coordinates | 39.0068 N, 76.7791 W Map |
Discovery Notes | -Sample collected around 11:00 am on 8/25/2016 in William's backyard in Bowie, MD. -Humidity/Temperature- 85%/69°F. Soil was moist |
Naming Notes | From the gorilla that held this nation together. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 16, 2017 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 200 |
Genome length (bp) | 21684 |
GC Content | 35.2% |
Character of genome ends | Unknown |
Direct Terminal Repeat Length | 16 bp |
End Determination Notes | Genome inspection. 16 bp inverted repeats: 5'-AAGATAGCCCCCCACC |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | Unclustered |
Subcluster | -- |
Plaque Notes | -2mm in diameter. Some were clear and some were turbid plaques |
Morphotype | Podoviridae |
Final annotation complete? | Yes |
Number of Genes | 33 |
Has been Phamerated? | No |
Uploaded to GenBank? | Yes: KY821088 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |
DNAMaster File | Download |