Details for Phage Hobo
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Detailed Information for Phage Hobo | |
Discovery Information | |
Found By | Kyle Gresham |
Year Found | 2013 |
Location Found | Monroe, LA USA |
Finding Institution | University of Louisiana at Monroe |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
GPS Coordinates | Unavailable |
Naming Notes | Soil sample retrieved from under the bridge that spans Bayou DeSiard on the ULM campus. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 9, 2014 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Ion Torrent Sequencing |
Approximate Shotgun Coverage | 360 |
Genome length (bp) | 165213 |
GC Content | 39.6% |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 7648 bp |
End Determination Notes | Buildup of reads flanking double coverage area in consed. |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | AF |
Subcluster | AF3 |
Other Cluster Members |
Click to View |
Plaque Notes | Hobo plaque morphology varied from small lytic to comet-shaped turbid plaques depending upon the duration and temperature of incubation. |
Morphotype | Myoviridae |
Final annotation complete? | Yes |
Number of Genes | 279 |
Number of tRNAs | 16 |
Has been Phamerated? | No |
Uploaded to GenBank? | Yes: MH638309 |