Details for Phage Flapjack
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Detailed Information for Phage Flapjack | |
Discovery Information | |
Found By | Victoria Payne & Julia Knapo |
Year Found | 2016 |
Location Found | Washinton, DC United States |
Finding Institution | University of Maryland, Baltimore County |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
GPS Coordinates | 38.951111 N, 77.08083 W Map |
Discovery Notes | Collected outside of a restaraunt in an urban location. Temp 92 F, Humidity 49%, soil was dry |
Naming Notes | Found in the soil outside of Washington D.C.'s Osman & Joe's Steak n' Egg Kitchen, the phage is named after a breakfast option |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 12, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 485 |
Genome length (bp) | 166137 |
GC Content | 37.6% |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 2806 bp |
End Determination Notes | Buildups of Illumina sequencing reads were clear. |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | AF |
Subcluster | AF1 |
Other Cluster Members |
Click to View |
Plaque Notes | 1.5 mm in size, clear in the center, turbidity increases around the edges, rough uneven edges |
Morphotype | Myoviridae |
Final annotation complete? | Yes |
Number of Genes | 288 |
Has been Phamerated? | No |
Uploaded to GenBank? | Yes: KY888882 |
Available Files | |
Plaque Picture | Download |
EM Picture | Download |