Detailed Information for Phage Adelynn | |
Discovery Information | |
Found By | Claire Merenda |
Year Found | 2012 |
Location Found | Fredericksburg, VA United States of America |
Finding Institution | University of Mary Washington |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
GPS Coordinates | 38.3026 N, 77.47353 W Map |
Discovery Notes | Collected on 9/2/12 from soil at 7.6 cm, in Fredericksburg, Virginia, at a temperature of 83° F. The site was urban, close to a building, at an elevation of 134 feet. Enriched on 9/10/12 |
Naming Notes | Just came up with the name. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Nov 13, 2013 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 3542 |
Genome length (bp) | 165049 |
GC Content | 37.8% |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 2693 bp |
End Determination Notes | Ends were clear from large buildups of Illumina sequencing reads. |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | C |
Subcluster | C3 |
Other Cluster Members |
Click to ViewHydralpha (None) JoeB (None) AaronPhadgers (C1) ALPS (C1) Archie14 (C1) Azalea (C1) Belinda (C1) Bhoosica (C1) Cletus (C1) DingnCase (C1) Dingus (C1) DirtyBetty (C1) Doofinshmirtz (C1) Elmer (C1) Escavirius (C1) Eyuki (C1) Freefood (C1) FreightTrain (C1) Grumio (C1) Hakuna (C1) Helga (C1) HonestAbe (C1) Ilona (C1) Kida (C1) Kota (C1) Lilihipha (C1) Megatron (C1) MightyMouse (C1) Momo (C1) Nemo (C1) Nigalana (C1) NotTheCreek (C1) OmnioDeoprimus (C1) Parsons (C1) PPIsBest (C1) Rex16 (C1) SageFayge (C1) SalinJah (C1) STSebastian (C1) Terra (C1) WPh (C1) Zuko (C1) Anthony (C2) Bastille (C2) CAM003 (C2) Evoli (C2) Herbert (C2) HoodyT (C2) Hudslayer (C2) Janet (C2) Kamfam (C2) OTooleKemple52 (C2) Vinny (C2) Adelynn (C3) Ampersand (C3) Anthos (C3) AvesoBmore (C3) B4 (C3) BigBertha (C3) ChannelFever (C3) Chotacabras (C3) ChurroBlast (C3) Flapjack (C3) GypsyDanger (C3) Joonam (C3) Juglone (C3) Natp (C3) Oregano (C3) Phabio (C3) Phrodo (C3) Riley (C3) Spock (C3) Taffo16 (C3) Troll (C3) Typhen (C3) BC4U (C4) BCP78 (C4) TsarBomba (C4) Bcp1 (C5) BM10 (C5) Hobo (C5) Kioshi (C5) |
Plaque Notes | Size: approximately 6mm. Appearance: clear. Incubation time: 24 hours. Incubation temp: 30° C |
Morphotype | Myoviridae |
Final annotation complete? | No |
Has been Phamerated? | No |
Uploaded to GenBank? | No |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |