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Details for Phage Oregano
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Detailed Information for Phage Oregano
Discovery Information
Found ByJessica Braun
Year Found2018
Location FoundColumbia, MD United States of America
Finding InstitutionUniversity of Maryland, Baltimore County
Program Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
GPS Coordinates39.19 N, 76.87 W Map
Discovery NotesFrom surface soil near Clemens Crossing Elementary School in Columbia, MD. Collected on 7/29/18. The soil was damp because it had previously rained.
Naming NotesOregano like the tasty herb
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 10, 2018
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage45
Genome length (bp)164440
GC Content37.8%
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length2336 bp
End Determination NotesBuildup of reads flanking double coverage area in consed.
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC3
Other Cluster Members
Plaque NotesCircular, cloudy plaques with smooth edges. Plaques were an average size of 1.1mm
MorphotypeMyoviridae
Final annotation complete?No
Has been Phamerated?No
Uploaded to GenBank?No
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload