| Detailed Information for Phage PPIsBest | |
| Discovery Information | |
| Found By | Nashwan Farooque |
| Year Found | 2016 |
| Location Found | Richmond, VA USA |
| Finding Institution | Virginia Commonwealth University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| GPS Coordinates | 37.546667 N, 77.450556 W Map |
| Discovery Notes | Found in the soil surrounding the main fountain in Monroe Park. This location is no longer accessible due to park renovation. |
| Naming Notes | Parantap Patel is master neurosurgeon from the jungles of India. He came to America when he was only 3 years old by boat. By age 5, he was head of neurology at MCV. Parantep Patel aka Ptap aka PP is the most talented and influential person I have ever met. He is very charming, dashing, and may I say god-like. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jun 18, 2017 |
| Sequencing Facility | Virginia Commonwealth University Nucleic Acids Research Facilities |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 100 |
| Genome length (bp) | 162281 |
| GC Content | 38.6% |
| Character of genome ends | Direct Terminal Repeat |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | C |
| Subcluster | C1 |
| Other Cluster Members |
Click to ViewHydralpha (None) JoeB (None) AaronPhadgers (C1) ALPS (C1) Archie14 (C1) Azalea (C1) Belinda (C1) Bhoosica (C1) Cletus (C1) DingnCase (C1) Dingus (C1) DirtyBetty (C1) Doofinshmirtz (C1) Elmer (C1) Escavirius (C1) Eyuki (C1) Freefood (C1) FreightTrain (C1) Grumio (C1) Hakuna (C1) Helga (C1) HonestAbe (C1) Ilona (C1) Kida (C1) Kota (C1) Lilihipha (C1) Megatron (C1) MightyMouse (C1) Momo (C1) Nemo (C1) Nigalana (C1) NotTheCreek (C1) OmnioDeoprimus (C1) Parsons (C1) PPIsBest (C1) Rex16 (C1) SageFayge (C1) SalinJah (C1) STSebastian (C1) Terra (C1) WPh (C1) Zuko (C1) Anthony (C2) Bastille (C2) CAM003 (C2) Evoli (C2) Herbert (C2) HoodyT (C2) Hudslayer (C2) Janet (C2) Kamfam (C2) OTooleKemple52 (C2) Vinny (C2) Adelynn (C3) Ampersand (C3) Anthos (C3) AvesoBmore (C3) B4 (C3) BigBertha (C3) ChannelFever (C3) Chotacabras (C3) ChurroBlast (C3) Flapjack (C3) GypsyDanger (C3) Joonam (C3) Juglone (C3) Natp (C3) Oregano (C3) Phabio (C3) Phrodo (C3) Riley (C3) Spock (C3) Taffo16 (C3) Troll (C3) Typhen (C3) BC4U (C4) BCP78 (C4) TsarBomba (C4) Bcp1 (C5) BM10 (C5) Hobo (C5) Kioshi (C5) |
| Plaque Notes | Plaque picked from the 10^-3 plate from the forth purification round Plaque was a perfect circle with clear defined boundary Diameter of 0.2 cm |
| Morphotype | Myoviridae |
| Final annotation complete? | Yes |
| Number of Genes | 301 |
| Has been Phamerated? | No |
| Uploaded to GenBank? | Yes: MF288917 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
