Detailed Information for Phage ALPS |
Discovery Information |
Found By | Ahmed Ismail, Linda Do, Perry Tanner |
Year Found | 2016 |
Location Found | Richmond, VA USA |
Finding Institution | Virginia Commonwealth University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
GPS Coordinates | 37.655944 N, 77.56907 W Map |
Discovery Notes | This phage was originally found by Krishna Karamsetty and was called MasterChief. |
Naming Notes | First letter of our names and added an "S" |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 12, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 638 |
Genome length (bp) | 161842 |
GC Content | 38.7% |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 2627 bp |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | C |
Subcluster | C1 |
Other Cluster Members |
|
Plaque Notes | The morphology is clear and round. |
Morphotype | Myoviridae |
Final annotation complete? | No |
Has been Phamerated? | No |
Uploaded to GenBank? | No |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |